rs8622 chr2:46858867 C>T
- Sequence
actttagtaactttggaactcact[C/T]accccgtgactaatacaccctgtc
- ASB in cell types
- LHSAR (prostate epithelial cells) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.99 | -0.45 | 1.70 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, alzheimers disease, barnes akathisia rating scale, bipolar disorder, major depressive disorder, schizophrenia, spine bone mineral density (bmd), tardive dyskinesia