rs871195 chr2:102118377 C>A
- Sequence
cttcatctggctgtcttctgtatc[C/A]tttattgtattctttattacatag
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.91 | -4.19 | 2.25 | 2.10 | Discordant |
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Motif analysis
Genetic associations
GRASP acute lung injury following major trauma, hdl cholesterol change with statins, height, refractive error, serum creatinine