ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs8732
chr4:82430668
A
>
G
Sequence
cttttccagttccaggtgtgcaga[A/G]gtgtcctctccccacgcgcggcgg
ASB in cell types
22RV1 (prostate carcinoma)
breast tumor
primary B-CLL cells
ASB for transcription factors
ANDR_HUMAN
ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
3.25
n/a
4.9·10
-5
1.00
2.00
n/a
No Hit
ESR1_HUMAN
3.40
n/a
2.0·10
-3
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
premature ovarian failure
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)