rs878235 chr1:19882332 C>G
- Sequence
tctatggcgtctgctcgccgagcc[C/G]cgcaaaagaggcggggattccatc
- ASB in cell types
- HEK293 (embryonic kidney) adult erythroblasts
- ASB for transcription factors
- SP2_HUMAN KDM6A_HUMAN PATZ1_HUMAN TIF1B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP2_HUMAN | 1.76 | n/a | 2.00 | -3.46 | Concordant | |||
| KDM6A_HUMAN | 2.15 | n/a | 2.00 | n/a | n/a | |||
| PATZ1_HUMAN | 2.79 | -5.12 | 2.00 | n/a | No Hit | |||
| TIF1B_HUMAN | 1.50 | -0.21 | 1.33 | n/a | n/a |
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Motif analysis
