rs878455 chr4:38529903 A>T

Sequence
gatcagaagagcaggacaggcaga[A/T]ccttcctcttctactgcgagagct
ASB in cell types
22RV1 (prostate carcinoma) VCaP (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.86 -5.08 5.7·10-31.00 2.00
VCaP (prostate carcinoma) 1.23 0.25 0.020.96 3.06
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) birth weight
GTEx eQTL Small_Intestine_Terminal_Ileum

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