rs878902 chr7:29876411 C>T
- Sequence
tccccattagtccctggcccttgc[C/T]aacccaatctactttctgtctctc
- ASB in cell types
- iPSC (induced pluripotent stem cells)
- ASB for transcription factors
- DUX4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DUX4_HUMAN | -3.01 | 3.06 | 1.00 | 3.08 | Concordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, body mass index (bmi), fasting blood glucose, fasting insulin, homa-ir, mitral annular calcium, serum creatinine