rs887740 chr12:7960848 T>C
- Sequence
aaccaaagaatttcttcctgtctg[T/C]atctaccctgtaggttagccccgc
- ASB in cell types
- HEK293 (embryonic kidney) SUM159PT (Triple negative breast cancer) monocytes from periferal blood TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- ZN335_HUMAN SRBP2_HUMAN ZN366_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN335_HUMAN | -5.08 | 3.00 | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 1.95 | 0.88 | 2.33 | n/a | No Hit | |||
| ZN366_HUMAN | n/a | 2.21 | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.22 | -2.17 | 1.50 | n/a | n/a | |||
| IKZF1_HUMAN | -0.47 | 1.72 | 1.38 | n/a | No Hit |
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