rs901354 chr2:8398535 A>G
- Sequence
tcacacatgtacatgcatacacat[A/G]catgcatacacatgtacgtgtaca
- ASB in cell types
- pancreas HepG2 (hepatoblastoma) HT1080 (fibrosarcoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN SSRP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.96 | -2.95 | 1.00 | n/a | No Hit | |||
| SSRP1_HUMAN | 1.32 | 1.51 | 1.00 | n/a | n/a |
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