rs912659 chr13:99606956 C>T
- Sequence
cgcgcctccctttgggagggccct[C/T]gttgcacccggaaaatgggtacac
- ASB in cell types
- adult erythroblasts HL-60 (acute myeloid leukemia) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- RBBP5_HUMAN INT13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBBP5_HUMAN | n/a | 3.56 | 2.00 | n/a | n/a | |||
| INT13_HUMAN | n/a | 2.15 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), irritible bowel syndrome, major depressive disorder, major depressive disorder (broad definition), major depressive disorder (broad definition) (females), major depressive disorder (broad definition) (males)