rs912902 chr1:182391795 A>G
- Sequence
cttctcccactctcgactctgcag[A/G]gccgccagcagccccgcacccttt
- ASB in cell types
- K562 (myelogenous leukemia) CD14+ monocytes monocytes from periferal blood Th2-cells
- ASB for transcription factors
- STAT1_HUMAN ANDR_HUMAN CTCF_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -0.61 | 2.54 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | -0.31 | 2.58 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.43 | 0.97 | 1.22 | n/a | No Hit | |||
| SRBP2_HUMAN | 0.15 | 3.20 | 3.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid