rs915614 chr22:22942812 T>C
- Sequence
cacacacacacagtcacacttaca[T/C]acccattcatgctcacacatttat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MM1.S (plasma cell myeloma) foreskin keratinocyte HEK293 (embryonic kidney)
- ASB for transcription factors
- BHE40_HUMAN BRD4_HUMAN IKZF2_HUMAN MBD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | 2.65 | n/a | 1.33 | n/a | No Hit | |||
| BRD4_HUMAN | 1.71 | -0.18 | 1.10 | n/a | n/a | |||
| IKZF2_HUMAN | 1.18 | -2.47 | 1.50 | n/a | n/a | |||
| MBD4_HUMAN | 2.21 | 0.21 | 1.00 | n/a | n/a | |||
| SMCA5_HUMAN | 2.86 | -2.57 | 1.50 | n/a | No Hit |
Items per page:
1 – 5 of 8