rs921921 chr12:124740785 A>G
- Sequence
tggccatcacgagaacaagagggc[A/G]gagagaagccttggcaggatttcc
- ASB in cell types
- liver CD14+ monocytes renal cortex
- ASB for transcription factors
- STAT1_HUMAN RXRA_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -2.11 | 2.21 | 2.00 | n/a | No Hit | |||
| RXRA_HUMAN | -2.44 | 1.77 | 1.50 | -5.30 | Discordant | |||
| CREB1_HUMAN | -2.15 | 2.42 | 1.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP hip bone mineral density (bmd), infant head circumference, ldl cholesterol change with statins