rs926269 chr1:11909691 C>T
- Sequence
ctccagaagccagctctggtcctt[C/T]agactcaaatactagggaacaatg
- ASB in cell types
- CD14+ monocytes K562 (myelogenous leukemia)
- ASB for transcription factors
- STAT1_HUMAN P66B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.40 | 1.89 | 2.50 | n/a | No Hit | |||
| P66B_HUMAN | 1.75 | -1.57 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, cystatin c in serum, diabetic retinopathy in type 2 diabetes mellitus, hypertension (early onset hypertension), late onset alzheimers disease, microalbuminuria, neuroblastoma (brain cancer)
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood