ADASTRA v5.1.3
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rs926611
chr20:50415335
C
>
T
Sequence
tagacactgcagtgacactgaatt[C/T]ctgctggggcctcgctcctgttgt
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
TEAD3_HUMAN
BRD2_HUMAN
ZFX_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TEAD3_HUMAN
2.28
-1.76
0.03
1.00
1.00
n/a
n/a
BRD2_HUMAN
1.79
-0.99
0.04
1.00
1.00
n/a
n/a
ZFX_HUMAN
-0.12
1.34
0.90
0.05
3.80
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
aortic valve calcium
,
ldl cholesterol
GTEx eQTL
Testis
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)