ADASTRA v5.1.3
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rs9266381
chr6:31367015
C
>
T
Sequence
gagccatgacatccctctctccac[C/T]tcaaagctcgtcctgggcatccac
ASB in cell types
K562 (myelogenous leukemia)
primary B-CLL cells
adult erythroblasts
HepG2 (hepatoblastoma)
Show more
(+3 others)
ASB for transcription factors
HDAC3_HUMAN
STAG1_HUMAN
KDM6A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HDAC3_HUMAN
n/a
3.42
1.00
6.8·10
-3
2.00
n/a
n/a
STAG1_HUMAN
0.45
0.17
0.02
1.00
1.00
n/a
n/a
KDM6A_HUMAN
2.29
-0.82
0.04
1.00
2.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
college completion
,
height
,
triglycerides
,
years of education
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Spinal_cord_cervical_c-1
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Cells_EBV-transformed_lymphocytes
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Ovary
,
Pancreas
,
Pituitary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)