rs927368 chr6:88630190 A>G

Sequence
gtttattcaaaattggagaaaact[A/G]tggaatggtgaaaagtaacaagcc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.02 -0.17 4.5·10-71.00 1.00 n/a No Hit
STAG1_HUMAN 2.43 -0.72 2.7·10-51.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP college completion hdl cholesterol
GTEx eQTL Esophagus_Mucosa Testis

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