rs9302064 chr13:95314597 A>C

Sequence
cagatcaaggaacagtcactgagt[A/C]aacatttctgatgtggttgatgta
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
FOXA2_HUMAN HM20A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 1.27 0.10 6.0·10-31.00 1.33 -4.22 Concordant
HM20A_HUMAN 2.47 -2.17 0.021.00 1.00 n/a n/a
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Motif analysis

FOXA2_HUMAN Concordant
FOXA2_HUMAN pic

Genetic associations

GRASP hip bone mineral density (bmd) intracranial aneurysm
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Spleen Stomach Thyroid

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