ADASTRA v5.1.3
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rs9324655
chr5:150777924
G
>
T
Sequence
atttaggcctggggaaggcagtat[G/T]gctctttccaaaccctccaaaaca
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines)
GM02610 (Lymphoblastoid Cell Lines)
GM02255 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN
STAG1_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
-2.77
2.84
1.00
3.6·10
-8
1.22
n/a
No Hit
STAG1_HUMAN
-3.24
3.10
1.00
1.5·10
-4
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
barnes akathisia rating scale
,
ldl cholesterol
,
maternal transmission distortion
,
salmonella-induced pyroptosis
,
triglycerides
GTEx eQTL
Muscle_Skeletal
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)