rs9325643 chr21:42818436 A>G

Sequence
ggtgatggtgggccccctggtggc[A/G]tgaagcgcagcagcaggaggaggg
ASB in cell types
T47D (invasive ductal carcinoma) IPSC-derived bipolar neuron K562 (myelogenous leukemia) HeLa Kyoto (cervical adenocarcinoma)
ASB for transcription factors
RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.48 0.60 3.1·10-41.00 1.34 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Stomach Testis Thyroid Whole_Blood

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