rs9325651 chr1:16896253 G>C
- Sequence
tgttaatcctacagtggagggctg[G/C]cgaataggaagtaacatgtcgcct
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) HEK293 (embryonic kidney) HCT-116 (colon carcinoma)
- ASB for transcription factors
- MBD4_HUMAN CTCF_HUMAN ZNF24_HUMAN ZN395_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MBD4_HUMAN | 1.08 | 0.58 | 1.57 | n/a | n/a | |||
| CTCF_HUMAN | 1.52 | 0.33 | 1.59 | 0.99 | Weak Discordant | |||
| ZNF24_HUMAN | 2.06 | -1.48 | 2.50 | n/a | n/a | |||
| ZN395_HUMAN | 1.93 | -1.33 | 1.00 | n/a | n/a | |||
| AHR_HUMAN | -0.23 | 1.23 | 1.00 | n/a | No Hit |
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Motif analysis
