rs936038 chr2:44532593 G>A

Sequence
ggaaaaatggcatggaaataaaca[G/A]tgacaatgcataatagctgtaata
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NFE2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFE2_HUMAN -5.49 3.16 1.003.7·10-3 2.00 0.50 Weak Concordant
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Motif analysis

NFE2_HUMAN Weak Concordant
NFE2_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  body mass index (bmi),  hdl cholesterol,  height,  lp-pla2 activity
GTEx eQTL Adrenal_Gland,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Muscularis,  Thyroid,  Whole_Blood

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