ADASTRA v5.1.3
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rs9368
chr12:56594558
C
>
A
Sequence
ctgcctacattttcaatcctccca[C/A]gcattagcaaattcctgaaatttc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZFHX2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFHX2_HUMAN
3.70
n/a
2.2·10
-5
1.00
2.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
arthritis including non-rheumatoid
,
platelet count
,
rheumatoid arthritis
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellum
,
Breast_Mammary_Tissue
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)