rs9388723 chr6:129676370 A>G
- Sequence
tccaataacaccattagaacctac[A/G]tcacagggtcagtctattcaaggg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MTA2_HUMAN SKIL_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | -0.95 | 2.43 | 1.75 | n/a | n/a | |||
| SKIL_HUMAN | -0.33 | 2.57 | 1.50 | n/a | n/a | |||
| IKZF2_HUMAN | 0.19 | 1.92 | 1.00 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, mitral annular calcium, tetrology of fallot, urinary albumin-to-creatinine ratio