ADASTRA v5.1.3
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rs9394399
chr6:37051840
G
>
A
Sequence
cctagtccaacccatgtgagtggg[G/A]ccatctgtgtgcccagcacggagc
ASB in cell types
A549 (lung carcinoma)
primary B-CLL cells
iPS-derived dermal fibroblasts
MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
ASB for transcription factors
RAD21_HUMAN
RBM25_HUMAN
BRD4_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.27
0.72
8.2·10
-3
0.87
1.48
n/a
n/a
RBM25_HUMAN
n/a
1.83
1.00
0.02
6.00
n/a
n/a
BRD4_HUMAN
2.02
0.72
0.04
0.55
2.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)