rs940310 chr18:54388911 A>C
- Sequence
tgtttagttaccaggcaagcagga[A/C]gccacaatggtgactcagtgtgtg
- ASB in cell types
- MOLM14 (Adult acute myeloid leukemia) ARP-1(Plasma cell myeloma)
- ASB for transcription factors
- CDK8_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK8_HUMAN | 3.18 | -3.31 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.93 | -4.37 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), decrease in fev1 (in asthmatic participants), hdl cholesterol, ldl cholesterol change with statins, lung function, forced expiratory volume in 1 second (fev1) percent predicted (in asthmatic participants), microalbuminuria, refractive error, schizophrenia, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Whole_Blood