rs941967 chr6:52504294 G>A
- Sequence
gcagcacttggctggggtccagaa[G/A]ccaccctgaggacacgcttcctgc
- ASB in cell types
- breast tumor 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 3.12 | -5.64 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP endometriosis, homa-ir, hypertension (early onset hypertension), ldl cholesterol, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Brain_Caudate_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid