rs9442951 chr6:73722913 C>T
- Sequence
aaacctcagactacttctgtacag[C/T]gtgtgaagtgtcccgcaagcacgt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM01310 ( Transformed lymphovlasoid cell line )
- ASB for transcription factors
- MEF2B_HUMAN AHR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | -0.43 | 2.01 | 1.17 | n/a | No Hit | |||
| AHR_HUMAN | 1.88 | -0.63 | 1.00 | -4.87 | Concordant |
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Motif analysis
Genetic associations
GRASP adiponectin levels, bipolar disorder, hdl cholesterol, microalbuminuria, partial epilepsy, prop taste detection threshold, transmission distortion
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Left_Ventricle, Spleen, Thyroid, Whole_Blood