rs9468831 chr6:30782067 C>T

Sequence
gctatctggatttctgccagcatt[C/T]cccggcccaggaaacagacttccg
ASB in cell types
CD14+ monocytes upper lobe of left lung monocytes from periferal blood macrophages
ASB for transcription factors
STAT1_HUMAN SRBP2_HUMAN ANDR_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.54 -5.64 1.1·10-61.00 2.00 n/a No Hit
SRBP2_HUMAN 2.38 -0.72 3.0·10-41.00 2.00 n/a No Hit
ANDR_HUMAN 2.68 n/a 3.6·10-31.00 2.00 n/a No Hit
IKZF1_HUMAN 1.44 0.12 0.041.00 1.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Nerve_Tibial Skin_Sun_Exposed_Lower_leg Spleen Thyroid

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