rs9551007 chr13:23793588 G>T

Sequence
tttattgggtacatactactaact[G/T]ttcagggccctgggaaaacaataa
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.13 0.07 1.8·10-51.00 2.06 n/a No Hit
FOXA1_HUMAN 0.90 0.17 0.021.00 1.71 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP acute lung injury following major trauma,  refractive error
GTEx eQTL Colon_Sigmoid,  Esophagus_Mucosa,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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