rs9555574 chr13:109278396 T>C
- Sequence
ttacatagttatttagtaattttc[T/C]catgatcctagtgatagatatatc
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | n/a | 3.27 | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, fasting blood glucose, fasting insulin, homa-ir, ldl cholesterol change with statins, total cholesterol change with statins, waist hip ratio