rs9600324 chr13:35209839 T>C
- Sequence
gtagaatgtactctattaagaata[T/C]ttatattggcaaatgaatgtcatt
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.32 | -1.82 | 1.80 | -5.72 | Concordant | |||
| ANDR_HUMAN | 1.78 | -0.14 | 1.64 | n/a | No Hit |
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Motif analysis
