ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs9605473
chr22:17980500
A
>
G
Sequence
tcctagtgggcaaggacaactttc[A/G]gctcctggaaaaccatcagcagag
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN
FOXK2_HUMAN
HDAC1_HUMAN
IKZF1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN
1.87
-1.66
0.01
1.00
1.00
n/a
n/a
FOXK2_HUMAN
1.92
-0.33
0.02
1.00
1.00
n/a
n/a
HDAC1_HUMAN
0.57
1.96
1.00
0.03
1.00
n/a
n/a
IKZF1_HUMAN
1.42
-0.92
0.05
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
,
lp-pla2 activity
,
major depressive disorder
,
triglycerides
GTEx eQTL
Cells_Cultured_fibroblasts
,
Cells_EBV-transformed_lymphocytes
,
Pancreas
,
Skin_Not_Sun_Exposed_Suprapubic
,
Thyroid
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)