ADASTRA v5.1.3
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rs9614
chr1:11650504
T
>
G
Sequence
ttacgcagaaggttgcggcgccgc[T/G]tgctcaggaagtagaactgctgcc
ASB in cell types
MCF7L-P(immortalized breast epithelial cell line)
glioblastoma cells
MCF7 (Invasive ductal breast carcinoma)
HCT-116 (colon carcinoma)
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(+2 others)
ASB for transcription factors
NFIB_HUMAN
MNT_HUMAN
P53_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFIB_HUMAN
n/a
2.41
1.00
1.6·10
-4
2.00
n/a
n/a
MNT_HUMAN
-0.34
1.53
1.00
0.04
1.00
n/a
n/a
P53_HUMAN
2.82
n/a
0.05
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Tibial
,
Lung
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)