rs9633680 chr10:110843268 A>G
- Sequence
aatgctagccggattgcacttgtg[A/G]cctctccttcctgagtgaaactag
- ASB in cell types
- CAR-T cells GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- COT1_HUMAN IRF4_HUMAN CBP_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | 2.27 | n/a | 1.00 | -3.17 | Concordant | |||
| IRF4_HUMAN | -1.90 | 2.29 | 1.00 | n/a | No Hit | |||
| CBP_HUMAN | 0.04 | 3.43 | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | 1.51 | -0.25 | 1.67 | n/a | No Hit | |||
| RUNX3_HUMAN | -1.79 | 2.33 | 1.00 | 4.66 | Concordant |
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Motif analysis
