rs9690074 chr7:47893338 G>C
- Sequence
gtgtgtggctgagatgtctcgagg[G/C]tgtccagagggggcgctgtaggga
- ASB in cell types
- GM18526 (B – cells Lymphoblastoid Cell Lines) D54 (H54, Human glioblastoma) 2588 (Lymphoblastoid Cell Lines) A673 (Ewing sarcoma)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.51 | 1.58 | 1.17 | n/a | n/a | |||
| CTCF_HUMAN | 0.35 | 1.24 | 1.53 | 0.83 | Weak Concordant |
Items per page:
1 – 2 of 2
Motif analysis
