ADASTRA v5.1.3
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rs971224
chr1:185602801
G
>
A
Sequence
ggatgcaagatgataaaagcctaa[G/A]ttaaggcacttagcagtgatgaca
ASB in cell types
iPSC-derived cardiomyocytes
ASB for transcription factors
TBX5_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX5_HUMAN
1.81
-3.49
0.03
1.00
1.50
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
arthritis including non-rheumatoid
,
hdl cholesterol
,
irritible bowel syndrome
,
schizophrenia
,
spine bone mineral density (bmd)
,
triglycerides change with statins
,
years of education
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Heart_Atrial_Appendage
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)