rs972139 chr11:79052710 T>C
- Sequence
atgcaccctttcagtctcttgggg[T/C]cgccatctgctggcctctcagcca
- ASB in cell types
- HeLa S3 (cervical adenocarcinoma) HMEC (human mammary epithelial cells) bipolar neuron GM23338
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.49 | 0.36 | 1.27 | 2.53 | Discordant |
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Motif analysis
