ADASTRA v5.1.3
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rs9782
chr12:102958048
T
>
C
Sequence
agggaggagaaaaagcattttcac[T/C]ttttttgctcccactctaagaagt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line)
0.90
0.55
0.03
0.72
1.09
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
hdl cholesterol
,
rosuvastatin induced change in c-reactive protein (crp)
,
tetrology of fallot
GTEx eQTL
Adipose_Visceral_Omentum
,
Brain_Amygdala
,
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellar_Hemisphere
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Hippocampus
,
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
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