rs978248 chr1:47555542 C>T
- Sequence
ccctgagatgccactcctattgtg[C/T]aaacagaggtgggaggcccaggta
- ASB in cell types
- HEK293 (embryonic kidney) CFPAC-1(pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- KLF17_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KLF17_HUMAN | -5.36 | 3.18 | 2.00 | n/a | n/a | |||
| FOXA2_HUMAN | -1.59 | 2.03 | 1.50 | 2.09 | Concordant |
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Motif analysis
