rs9834676 chr3:167735483 G>A
- Sequence
agagacgcctgggtggggcaggag[G/A]ccgctccaggtgtgagccacagag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- TCF21_HUMAN NFXL1_HUMAN ANDR_HUMAN HCFC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 1.91 | n/a | 2.50 | n/a | n/a | |||
| NFXL1_HUMAN | 2.62 | 0.25 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.62 | -4.84 | 2.00 | n/a | No Hit | |||
| HCFC1_HUMAN | -2.24 | 2.36 | 1.00 | n/a | n/a |
Items per page:
1 – 4 of 4