rs9847278 chr3:191329743 A>G
- Sequence
ggaaggtaagggccccggagggag[A/G]gcgcgcgggaccctcccctctccc
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) MCF-7 C4-12 (invasive breast ductal carcinoma)
- ASB for transcription factors
- HMGB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HMGB1_HUMAN | n/a | 2.84 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Amygdala, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Pancreas, Spleen, Testis, Thyroid