ADASTRA v5.1.3
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rs9878775
chr3:182942165
T
>
C
Sequence
acatgtacttataatgccatatta[T/C]gcaagtacagtattgttaataaag
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
FOXA1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
-0.05
1.79
1.00
4.7·10
-9
1.63
n/a
No Hit
FOXA1_HUMAN
-0.16
1.53
1.00
3.1·10
-6
1.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
acute lung injury following major trauma
,
attention deficit-hyperactivity disorder (adhd) combined subtype
,
parkinsons disease
,
parkinsons disease (pd)
,
sporadic creutzfeldt-jakob disease
,
stabilized warfarin dose
GTEx eQTL
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)