rs988551 chr6:129475892 T>C
- Sequence
caggcctgcagatatgcaaacatt[T/C]acacagcctttgcacctcttgtca
- ASB in cell types
- LNCaP (prostate carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA1_HUMAN FOXP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.49 | -0.27 | 1.83 | n/a | No Hit | |||
| FOXP1_HUMAN | 3.16 | n/a | 2.00 | n/a | No Hit |
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