rs9888556 chr14:106831334 A>G
- Sequence
cctcccaaagtgctgggattacag[A/G]cgtgagccaccgcgcccagccgcc
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines) HEK293 (embryonic kidney)
- ASB for transcription factors
- STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.61 | -0.80 | 1.17 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Spleen, Whole_Blood