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rs9895057 chr17:17300884 G>T

Sequence
atgccgctgcagttgccctgctgc[G/T]gctctggcccagcatctctgtgct
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) CD4+ T cells from blood HCT-116 (colon carcinoma)
ASB for transcription factors
ZN519_HUMAN RBM25_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN519_HUMAN 3.24 n/a 5.5·10-41.00 2.00 n/a n/a
RBM25_HUMAN -3.62 1.97 1.000.01 2.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Testis

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