rs9897815 chr17:75314409 C>T

Sequence
accctttcaccccaggctcgggcc[C/T]ttgcacaggcctgcagcacgaggc
ASB in cell types
primary B-CLL cells GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ZN687_HUMAN IKZF2_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN687_HUMAN -2.45 2.81 1.003.0·10-3 1.00 n/a n/a
IKZF2_HUMAN -0.16 2.39 1.000.01 1.00 n/a n/a
BRD4_HUMAN 1.76 -0.04 0.031.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP height
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Mucosa Lung Nerve_Tibial Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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