ADASTRA v5.1.3
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rs9915279
chr17:74776709
T
>
C
Sequence
gagagggagaggctgggagtgggg[T/C]tcttgagaaaagagggagctttga
ASB in cell types
keratinocytes
ASB for transcription factors
NRF1_HUMAN
SNAI2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NRF1_HUMAN
0.74
0.06
2.3·10
-3
0.88
2.00
n/a
No Hit
SNAI2_HUMAN
n/a
2.38
1.00
0.03
1.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
comorbid depressive syndrome and alcohol dependence
GTEx eQTL
Adipose_Subcutaneous
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)