ADASTRA v5.1.3
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rs9936006
chr16:90082247
G
>
A
Sequence
cctcgggagacatggggacacttg[G/A]ggccgcgtccacagtgagacaggg
ASB in cell types
GM12890 (Lymphoblastoid Cell Lines)
GM02610 (Lymphoblastoid Cell Lines)
MDM(monocyte derived macrophages)
CD14+ monocytes
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(+4 others)
ASB for transcription factors
SPI1_HUMAN
STAT1_HUMAN
KDM6A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
2.84
0.14
4.2·10
-4
0.98
1.83
n/a
No Hit
STAT1_HUMAN
3.12
-5.64
5.0·10
-4
1.00
2.00
n/a
No Hit
KDM6A_HUMAN
1.68
n/a
0.02
1.00
2.50
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Cortex
,
Brain_Hippocampus
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)