rs9970530 chr1:40802642 G>A
- Sequence
gctgaggagaaggagcccgggcgg[G/A]ggaagggggccgagggctgtgctg
- ASB in cell types
- K562 (myelogenous leukemia) WA01 (H1, human embryonic stem cells)
- ASB for transcription factors
- NCOR1_HUMAN RB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOR1_HUMAN | 2.09 | -0.98 | 1.00 | n/a | n/a | |||
| RB_HUMAN | -0.86 | 2.41 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Nerve_Tibial, Testis