rs9997134 chr4:3467242 T>C

Sequence
gcccctgccttccctgggccacca[T/C]gcctgcttgctccatcttccctgc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) MDA-MB-134 (invasive lobular breast carcinoma)
ASB for transcription factors
ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 0.37 1.69 1.001.6·10-9 2.17 -2.30 Discordant
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Motif analysis

ESR1_HUMAN Discordant
ESR1_HUMAN pic

Genetic associations

GTEx eQTL Lung Skin_Sun_Exposed_Lower_leg Thyroid

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